Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna-processing protein rimm | SAMEA3753290_05483 | Not Available | Negative | 5498273 - 5498821 | 20606.6 |
| 30s ribosomal protein s16 | SAMEA3753290_05484 | Not Available | Negative | 5498840 - 5499088 | 9191.08 |
| signal recognition particle protein | SAMEA3753290_05485 | Not Available | Negative | 5499225 - 5500586 | 49790.5 |
| putative magnesium transport protein | SAMEA3753290_05486 | Not Available | Positive | 5500678 - 5501544 | 32131.5 |
| inner membrane protein, upf0053 family | SAMEA3753290_05487 | Not Available | Positive | 5501610 - 5502851 | 46353.9 |
| heat shock protein | SAMEA3753290_05488 | Not Available | Negative | 5502906 - 5503499 | 21813.1 |
| inorganic polyphosphate/atp-nad kinase | SAMEA3753290_05489 | Not Available | Positive | 5503622 - 5504500 | 32568.3 |
| dna repair protein | SAMEA3753290_05490 | Not Available | Positive | 5504586 - 5506247 | 61400.1 |
| putative outer membrane assembly lipoprotein | SAMEA3753290_05491 | Not Available | Positive | 5506396 - 5506737 | 12302.8 |
| rnfh family protein | SAMEA3753290_05492 | Not Available | Negative | 5506799 - 5507089 | 10789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





