Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3753290_05379 | Not Available | Positive | 5420804 - 5421496 | 26063.5 |
| major facilitator superfamily protein | SAMEA3753290_05380 | Not Available | Positive | 5421519 - 5422946 | 51431.8 |
| ribose operon repressor | SAMEA3753290_05381 | Not Available | Negative | 5422912 - 5423904 | 36587.1 |
| ribokinase | SAMEA3753290_05382 | Not Available | Negative | 5423908 - 5424837 | 32307.4 |
| d-ribose transporter subunit rbsb | SAMEA3753290_05383 | Not Available | Negative | 5424963 - 5425853 | 30940.2 |
| high-affinity ribose transport system permease protein rbsc | SAMEA3753290_05384 | Not Available | Negative | 5425878 - 5426843 | 33454.0 |
| high affinity ribose transport atp-binding protein rbsa | SAMEA3753290_05385 | Not Available | Negative | 5426848 - 5428353 | 54957.0 |
| d-ribose high-affinity transporter | SAMEA3753290_05386 | Not Available | Negative | 5428361 - 5428780 | 15274.4 |
| kup system potassium uptake protein | SAMEA3753290_05387 | Not Available | Negative | 5428947 - 5430815 | 69298.3 |
| regulatory atpase rava | SAMEA3753290_05388 | Not Available | Positive | 5431038 - 5432534 | 56392.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





