Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer pilus assembly protein trae | SAMEA3753290_05233 | Not Available | Negative | 5281923 - 5282486 | 21301.9 |
| conjugal transfer pilus assembly protein tral | SAMEA3753290_05234 | Not Available | Negative | 5282506 - 5282811 | 11976.8 |
| type iv conjugative transfer system pilin traa | SAMEA3753290_05235 | Not Available | Negative | 5282813 - 5283172 | 12865.2 |
| uncharacterised protein | SAMEA3753290_05236 | Not Available | Negative | 5283270 - 5283437 | 6269.87 |
| uncharacterised protein | SAMEA3753290_05237 | Not Available | Negative | 5283653 - 5283934 | 10962.5 |
| incf transfer protein tram | SAMEA3753290_05238 | Not Available | Negative | 5284414 - 5284800 | 14917.9 |
| putative transglycosylase | SAMEA3753290_05239 | Not Available | Positive | 5285270 - 5285776 | 18875.8 |
| yubp | SAMEA3753290_05240 | Not Available | Negative | 5286079 - 5286213 | 4936.93 |
| yubp | SAMEA3753290_05241 | Not Available | Negative | 5286232 - 5286588 | 13611.2 |
| plasmid sos inhibition protein a | SAMEA3753290_05243 | Not Available | Negative | 5287643 - 5288362 | 27670.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





