Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | SAMEA3753290_05182 | Not Available | Negative | 5234001 - 5234651 | 24326.3 |
| uncharacterised protein | SAMEA3753290_05183 | Not Available | Positive | 5235030 - 5235215 | 6997.6 |
| uncharacterised protein | SAMEA3753290_05184 | Not Available | Negative | 5235238 - 5235465 | 8704.66 |
| putative restriction methylase | SAMEA3753290_05185 | Not Available | Negative | 5235704 - 5235856 | 5575.79 |
| aec78 | SAMEA3753290_05186 | Not Available | Negative | 5235941 - 5236138 | 7379.73 |
| aec77 | SAMEA3753290_05187 | Not Available | Negative | 5236150 - 5236638 | 18169.9 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753290_05188 | Not Available | Negative | 5236635 - 5237009 | 14005.8 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753290_05189 | Not Available | Negative | 5237099 - 5237467 | 13507.0 |
| uncharacterised protein | SAMEA3753290_05190 | Not Available | Negative | 5237517 - 5237630 | 4260.86 |
| cp4-44 prophage | SAMEA3753290_05191 | Not Available | Negative | 5237630 - 5237851 | 8409.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





