Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein fimd | SAMEA3753290_05172 | Not Available | Negative | 5222872 - 5225508 | 96555.9 |
| type i fimbrial chaperone | SAMEA3753290_05173 | Not Available | Negative | 5225575 - 5226300 | 26660.5 |
| type-1 fimbrial protein fimi | SAMEA3753290_05174 | Not Available | Negative | 5226337 - 5226783 | 15932.0 |
| type 1 fimbriae major subunit fima | SAMEA3753290_05175 | Not Available | Negative | 5226941 - 5227495 | 18609.9 |
| tyrosine recombinase | SAMEA3753290_05176 | Not Available | Negative | 5227977 - 5228573 | 23048.5 |
| tyrosine recombinase | SAMEA3753290_05177 | Not Available | Negative | 5229050 - 5229652 | 22994.8 |
| uncharacterised protein | SAMEA3753290_05178 | Not Available | Positive | 5229912 - 5230307 | 14777.0 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3753290_05179 | Not Available | Positive | 5231106 - 5231822 | 27889.4 |
| n-acetylneuraminic acid mutarotase | SAMEA3753290_05180 | Not Available | Positive | 5231842 - 5232948 | 39604.2 |
| yjhs protein | SAMEA3753290_05181 | Not Available | Positive | 5233013 - 5233993 | 36866.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





