Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyglutaryl-coa dehydratase | SAMEA3753290_05152 | Not Available | Positive | 5204824 - 5205975 | 42745.2 |
| atpase, activator of (r)-hydroxyglutaryl-coa dehydratase | SAMEA3753290_05153 | Not Available | Positive | 5205985 - 5206752 | 27236.8 |
| protein of uncharacterised function (duf3343) | SAMEA3753290_05154 | Not Available | Positive | 5206749 - 5207006 | 9554.6 |
| sdia-regulated domain protein | SAMEA3753290_05155 | Not Available | Positive | 5206960 - 5207931 | 35996.4 |
| major facilitator superfamily protein | SAMEA3753290_05156 | Not Available | Positive | 5207999 - 5209177 | 41375.2 |
| rna 2'-phosphotransferase-like protein | SAMEA3753290_05157 | Not Available | Negative | 5209190 - 5209744 | 20530.7 |
| putative transporter | SAMEA3753290_05158 | Not Available | Positive | 5209994 - 5210677 | 23795.8 |
| putative transporter | SAMEA3753290_05159 | Not Available | Positive | 5210674 - 5211135 | 16194.5 |
| isoaspartyl dipeptidase | SAMEA3753290_05160 | Not Available | Positive | 5211148 - 5212320 | 41059.3 |
| dna-binding transcriptional regulator | SAMEA3753290_05161 | Not Available | Positive | 5212385 - 5213296 | 34703.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





