Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactose:(glucosyl) lps alpha1,2-galactosyltransferase waat | SAMEA3753290_05044 | Not Available | Negative | 5119301 - 5120296 | 38520.8 |
| udp-glucose:(glucosyl) lps alpha1,3-glucosyltransferase waao | SAMEA3753290_05045 | Not Available | Negative | 5120313 - 5121329 | 38773.8 |
| kinase that phosphorylates core heptose of lipopolysaccharide | SAMEA3753290_05046 | Not Available | Negative | 5121345 - 5122142 | 31053.1 |
| udp-glucose:(heptosyl) lps alpha-1,3-glucosyltransferase | SAMEA3753290_05047 | Not Available | Negative | 5122135 - 5123259 | 42530.6 |
| lipopolysaccharide core biosynthesis protein | SAMEA3753290_05048 | Not Available | Negative | 5123256 - 5124314 | 39448.9 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3753290_05050 | Not Available | Positive | 5124727 - 5126004 | 47293.9 |
| phosphopantetheine adenylyltransferase | SAMEA3753290_05051 | Not Available | Positive | 5126012 - 5126491 | 17837.7 |
| formamidopyrimidine-dna glycosylase | SAMEA3753290_05052 | Not Available | Negative | 5126530 - 5127339 | 30261.8 |
| 50s ribosomal protein l33 | SAMEA3753290_05053 | Not Available | Negative | 5127437 - 5127604 | 6371.94 |
| 50s ribosomal protein l28 | SAMEA3753290_05054 | Not Available | Negative | 5127625 - 5127861 | 9007.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





