Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase (nucleoside 5'-monophosphate phosphohydrolase) | SAMEA3753290_04962 | Not Available | Positive | 5031446 - 5032123 | 25302.0 |
| peptide chain release factor 3 | SAMEA3753290_04963 | Not Available | Positive | 5032214 - 5033803 | 59565.4 |
| periplasmic protein | SAMEA3753290_04964 | Not Available | Positive | 5034196 - 5034801 | 21074.8 |
| protein | SAMEA3753290_04965 | Not Available | Positive | 5034928 - 5035089 | 5536.27 |
| patatin-like phospholipase | SAMEA3753290_04966 | Not Available | Positive | 5035211 - 5036284 | 39820.1 |
| putative deoxyribonuclease | SAMEA3753290_04967 | Not Available | Positive | 5036281 - 5037060 | 28929.8 |
| radical sam superfamily protein | SAMEA3753290_04968 | Not Available | Negative | 5037094 - 5037957 | 31418.2 |
| glycine radical enzyme, yjji family | SAMEA3753290_04969 | Not Available | Negative | 5037929 - 5039479 | 58069.4 |
| deoxyribose-phosphate aldolase | SAMEA3753290_04970 | Not Available | Positive | 5039737 - 5040516 | 27749.3 |
| thymidine phosphorylase | SAMEA3753290_04971 | Not Available | Positive | 5040643 - 5041965 | 47182.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





