Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin synthase | SAMEA3753290_04901 | Not Available | Positive | 4963776 - 4964519 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3753290_04902 | Not Available | Positive | 4964531 - 4965610 | 36917.2 |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3753290_04903 | Not Available | Positive | 4965672 - 4966607 | 34466.2 |
| Trna-asn | Not Available | Not Available | Positive | 4966663 - 4966738 | Not Available |
| nitrogen assimilation regulatory protein nac | SAMEA3753290_04905 | Not Available | Positive | 4967064 - 4967981 | 32803.9 |
| lysr family transcriptional regulator | SAMEA3753290_04906 | Not Available | Positive | 4968083 - 4969033 | 35898.1 |
| Trna-asn | Not Available | Not Available | Positive | 4969071 - 4969146 | Not Available |
| multidrug efflux system | SAMEA3753290_04908 | Not Available | Positive | 4969340 - 4970794 | 52802.1 |
| Trna-asn | Not Available | Not Available | Positive | 4970895 - 4970970 | Not Available |
| putative cytoplasmic protein | SAMEA3753290_04910 | Not Available | Negative | 4971428 - 4972144 | 25868.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





