Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilm | SAMEA3753290_04829 | Not Available | Negative | 4911783 - 4912220 | 16451.9 |
| toxin co-regulated pilus biosynthesis protein q | SAMEA3753290_04830 | Not Available | Negative | 4912226 - 4913461 | 45608.1 |
| trbm-domain protein | SAMEA3753290_04831 | Not Available | Negative | 4913464 - 4913763 | 10487.8 |
| trad protein | SAMEA3753290_04832 | Not Available | Negative | 4913830 - 4914465 | 23126.6 |
| conjugal transfer protein trac | SAMEA3753290_04833 | Not Available | Positive | 4914609 - 4915304 | 27470.9 |
| uncharacterised protein | SAMEA3753290_04834 | Not Available | Negative | 4915382 - 4915618 | 8834.64 |
| conjugal transfer protein trbj | SAMEA3753290_04835 | Not Available | Negative | 4915622 - 4916269 | 24673.1 |
| conjugal transfer protein | SAMEA3753290_04836 | Not Available | Negative | 4916275 - 4917261 | 34961.8 |
| uncharacterised protein | SAMEA3753290_04837 | Not Available | Negative | 4917265 - 4917522 | 9620.51 |
| uncharacterised protein | SAMEA3753290_04838 | Not Available | Negative | 4917519 - 4917821 | 11311.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





