Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3753290_04671 | Not Available | Negative | 4753685 - 4754110 | 15936.0 |
| protein ydia | SAMEA3753290_04672 | Not Available | Positive | 4754764 - 4755477 | 26738.1 |
| putative mobilization protein mobc | SAMEA3753290_04673 | Not Available | Negative | 4755697 - 4756032 | 12432.7 |
| relaxosome component | SAMEA3753290_04674 | Not Available | Positive | 4756266 - 4756598 | 12614.3 |
| relaxase/mobilization nuclease domain-containing protein | SAMEA3753290_04675 | Not Available | Positive | 4756609 - 4759308 | 104003.0 |
| conjugal transfer protein, trbc | SAMEA3753290_04676 | Not Available | Negative | 4759345 - 4761636 | 86946.0 |
| conjugal transfer protein, trbb | SAMEA3753290_04677 | Not Available | Negative | 4761629 - 4762699 | 39571.5 |
| conjugal transfer protein | SAMEA3753290_04678 | Not Available | Negative | 4762718 - 4763926 | 46000.9 |
| uncharacterised protein | SAMEA3753290_04680 | Not Available | Negative | 4764442 - 4764693 | 9254.08 |
| uncharacterised protein | SAMEA3753290_04681 | Not Available | Positive | 4765192 - 4765287 | 3371.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





