Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMEA3753290_04587 | Not Available | Positive | 4668105 - 4668746 | 24354.6 |
| 2'-deoxycytidine 5'-triphosphate deaminase | SAMEA3753290_04588 | Not Available | Positive | 4668838 - 4669419 | 21222.4 |
| putative outer membrane assembly protein | SAMEA3753290_04589 | Not Available | Positive | 4669441 - 4671294 | 68941.0 |
| transporter | SAMEA3753290_04590 | Not Available | Negative | 4671753 - 4673336 | 59420.8 |
| putative polysaccharide export protein | SAMEA3753290_04592 | Not Available | Positive | 4673995 - 4675134 | 41912.4 |
| protein-tyrosine-phosphatase | SAMEA3753290_04593 | Not Available | Positive | 4675140 - 4675583 | 16710.2 |
| tyrosine kinase | SAMEA3753290_04594 | Not Available | Positive | 4675586 - 4677748 | 79375.8 |
| putative glycosyl transferase | SAMEA3753290_04595 | Not Available | Positive | 4677926 - 4678765 | 32995.4 |
| putative acetyltransferase | SAMEA3753290_04596 | Not Available | Positive | 4678768 - 4679256 | 17614.6 |
| putative glycosyltransferase | SAMEA3753290_04597 | Not Available | Positive | 4679253 - 4680470 | 45270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





