Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase | SAMEA3753290_04514 | Not Available | Positive | 4594062 - 4595192 | 42220.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | SAMEA3753290_04515 | Not Available | Positive | 4595189 - 4596451 | 45841.3 |
| dtdp-glucose 4,6-dehydratase | SAMEA3753290_04516 | Not Available | Positive | 4596451 - 4597518 | 39796.0 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3753290_04517 | Not Available | Positive | 4597537 - 4598418 | 32736.3 |
| tdp-fucosamine acetyltransferase | SAMEA3753290_04518 | Not Available | Positive | 4598396 - 4599070 | 24221.7 |
| dtdp-4-oxo-6-deoxy-d-glucose transaminase | SAMEA3753290_04519 | Not Available | Positive | 4599075 - 4600205 | 41903.4 |
| lipid iii flippase | SAMEA3753290_04520 | Not Available | Positive | 4600207 - 4601457 | 44962.3 |
| 4-alpha-l-fucosyltransferase | SAMEA3753290_04521 | Not Available | Positive | 4601454 - 4602533 | 40561.7 |
| putative eca polymerase | SAMEA3753290_04522 | Not Available | Positive | 4602530 - 4603882 | 51524.2 |
| udp-n-acetyl-d-mannosaminuronic acid transferase | SAMEA3753290_04523 | Not Available | Positive | 4603885 - 4604625 | 27963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





