Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | SAMEA3753290_04299 | Not Available | Negative | 4373815 - 4374693 | 31646.4 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | SAMEA3753290_04300 | Not Available | Negative | 4374668 - 4375219 | 20301.6 |
| citrate lyase subunit alpha | SAMEA3753290_04301 | Not Available | Negative | 4375223 - 4376755 | 55194.0 |
| citrate lyase subunit beta | SAMEA3753290_04302 | Not Available | Negative | 4376766 - 4377674 | 33111.6 |
| citrate lyase acyl carrier protein (citrate lyase gamma chain) | SAMEA3753290_04303 | Not Available | Negative | 4377671 - 4377967 | 10689.9 |
| citrate lyase synthetase | SAMEA3753290_04304 | Not Available | Negative | 4377982 - 4379040 | 40079.5 |
| sensor kinase dpib | SAMEA3753290_04305 | Not Available | Positive | 4379420 - 4381078 | 61659.7 |
| two-component response regulator | SAMEA3753290_04306 | Not Available | Positive | 4381047 - 4381727 | 25454.9 |
| c4-dicarboxylate transporter dcuc | SAMEA3753290_04307 | Not Available | Negative | 4381768 - 4383153 | 48415.3 |
| subunit of palmitoyl transferase for lipid a | SAMEA3753290_04308 | Not Available | Positive | 4383742 - 4384302 | 21770.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





