Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiif protein | SAMEA3753290_04223 | Not Available | Negative | 4297239 - 4297481 | 9244.94 |
| copg-family dna-binding protein | SAMEA3753290_04224 | Not Available | Negative | 4297699 - 4297917 | 8408.23 |
| uncharacterised protein | SAMEA3753290_04225 | Not Available | Negative | 4298252 - 4298359 | 4064.09 |
| putative acetyltransferase | SAMEA3753290_04226 | Not Available | Negative | 4298774 - 4299715 | 35353.4 |
| d-tyrosyl-trna(tyr) deacylase | SAMEA3753290_04227 | Not Available | Negative | 4299760 - 4300197 | 15951.0 |
| pp_04043 | SAMEA3753290_04228 | Not Available | Negative | 4300194 - 4301066 | Not Available |
| phosphatase | SAMEA3753290_04229 | Not Available | Negative | 4301060 - 4301659 | 22733.0 |
| transcriptional regulator, deor/gntr family | SAMEA3753290_04230 | Not Available | Negative | 4301758 - 4302543 | 28509.0 |
| kinase | SAMEA3753290_04231 | Not Available | Negative | 4302577 - 4303473 | 31728.5 |
| putative phosphogluconate dehydrogenase | SAMEA3753290_04232 | Not Available | Positive | 4303641 - 4304537 | 31176.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





