Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | SAMEA3753290_04202 | Not Available | Negative | 4274080 - 4274754 | 25346.1 |
| 2-keto-3-deoxygluconate permease | SAMEA3753290_04203 | Not Available | Negative | 4274903 - 4275886 | 33671.4 |
| mn dependent superoxide dismutase | SAMEA3753290_04204 | Not Available | Negative | 4276146 - 4276766 | 23080.2 |
| l rhamnose-proton symporter | SAMEA3753290_04205 | Not Available | Positive | 4277051 - 4278085 | 37288.1 |
| transcriptional activator rhar | SAMEA3753290_04206 | Not Available | Negative | 4278082 - 4279020 | 35628.3 |
| l-rhamnose operon regulatory protein | SAMEA3753290_04207 | Not Available | Negative | 4279004 - 4279840 | 32331.2 |
| rhamnulokinase | SAMEA3753290_04208 | Not Available | Positive | 4280128 - 4281597 | 54126.4 |
| l-rhamnose isomerase | SAMEA3753290_04209 | Not Available | Positive | 4281594 - 4282853 | 47142.9 |
| rhamnulose-1-phosphate aldolase | SAMEA3753290_04210 | Not Available | Positive | 4282936 - 4283760 | 30108.2 |
| l-rhamnose mutarotase | SAMEA3753290_04211 | Not Available | Positive | 4283770 - 4284084 | 12235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





