Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein yghd | SAMEA3753290_03997 | Not Available | Negative | 4083470 - 4084006 | 20382.7 |
| type ii secretion system protein l | SAMEA3753290_03998 | Not Available | Negative | 4084008 - 4085186 | 44115.3 |
| type ii secretion system protein k | SAMEA3753290_03999 | Not Available | Negative | 4085183 - 4086160 | 36544.3 |
| type ii secretion protein gspj | SAMEA3753290_04000 | Not Available | Negative | 4086163 - 4086762 | 22193.2 |
| type ii secretion system protein i | SAMEA3753290_04001 | Not Available | Negative | 4086759 - 4087130 | 13573.3 |
| type ii secretion system protein h | SAMEA3753290_04002 | Not Available | Negative | 4087127 - 4087690 | 21165.7 |
| general secretion pathway protein g precursor (epsg-like) | SAMEA3753290_04003 | Not Available | Negative | 4087694 - 4088149 | 16712.9 |
| type ii secretion system protein f | SAMEA3753290_04004 | Not Available | Negative | 4088166 - 4089389 | 44912.6 |
| type ii secretion system protein e | SAMEA3753290_04005 | Not Available | Negative | 4089389 - 4090882 | 55221.8 |
| type ii secretion system protein d | SAMEA3753290_04006 | Not Available | Negative | 4090882 - 4092942 | 74206.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





