Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-arabinose 5-phosphate isomerase | SAMEA3753290_03927 | Not Available | Positive | 4014461 - 4015426 | 34033.6 |
| putative two-component transcriptional regulator | SAMEA3753290_03928 | Not Available | Negative | 4015423 - 4016937 | 55356.8 |
| anaerobic nitric oxide reductase flavorubredoxin | SAMEA3753290_03929 | Not Available | Positive | 4017124 - 4018563 | 54224.0 |
| nitric oxide reductase flrd-nad(+) reductase | SAMEA3753290_03930 | Not Available | Positive | 4018560 - 4019693 | 41378.1 |
| hydrogenase maturation protein hypf | SAMEA3753290_03931 | Not Available | Negative | 4019821 - 4022073 | 81877.4 |
| electron transport protein hydn | SAMEA3753290_03932 | Not Available | Negative | 4022226 - 4022753 | 19027.2 |
| transcriptional regulator | SAMEA3753290_03933 | Not Available | Negative | 4022902 - 4023915 | 36916.4 |
| arbutin-, cellobiose-, and salicin-specific pts system eiibc component | SAMEA3753290_03934 | Not Available | Positive | 4024172 - 4025629 | 51192.3 |
| 6-phospho-beta-glucosidase | SAMEA3753290_03935 | Not Available | Positive | 4025638 - 4027062 | 53802.6 |
| hth-type transcriptional regulator ygjm | SAMEA3753290_03936 | Not Available | Negative | 4027176 - 4027595 | 15417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





