Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trhu | SAMEA3753290_03753 | Not Available | Negative | 3859764 - 3860816 | 38788.4 |
| uncharacterised protein | SAMEA3753290_03754 | Not Available | Negative | 3860828 - 3860959 | 4980.22 |
| plasmid transfer protein trhw | SAMEA3753290_03755 | Not Available | Negative | 3860961 - 3862469 | 56501.1 |
| putative conjugative transfer system signal peptidase | SAMEA3753290_03756 | Not Available | Negative | 3862456 - 3862968 | 19380.8 |
| protein of uncharacterised function (duf3607) | SAMEA3753290_03757 | Not Available | Negative | 3863242 - 3867462 | 155530.0 |
| putative plasmid transfer protein | SAMEA3753290_03758 | Not Available | Negative | 3867660 - 3868217 | 20532.8 |
| putative plasmid transfer protein | SAMEA3753290_03759 | Not Available | Negative | 3868220 - 3868654 | 15759.1 |
| putative transfer repressor | SAMEA3753290_03760 | Not Available | Negative | 3868644 - 3869096 | 16664.1 |
| parr | SAMEA3753290_03761 | Not Available | Negative | 3869661 - 3870338 | 25258.8 |
| putative plasmid stability/partition protein | SAMEA3753290_03762 | Not Available | Negative | 3870382 - 3871416 | 37954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





