Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | SAMEA3753290_03662 | Not Available | Positive | 3782748 - 3784145 | 53504.3 |
| uncharacterised protein | SAMEA3753290_03663 | Not Available | Positive | 3784408 - 3785214 | 31902.5 |
| transposase tnpa, tn21 | SAMEA3753290_03664 | Not Available | Negative | 3785469 - 3788435 | 111093.0 |
| transposon tn21 resolvase | SAMEA3753290_03665 | Not Available | Negative | 3788438 - 3788692 | 9764.84 |
| transposase, is26 | SAMEA3753290_03666 | Not Available | Negative | 3788785 - 3789489 | 27896.9 |
| aac3-vi | SAMEA3753290_03667 | Not Available | Positive | 3789603 - 3790379 | 27907.6 |
| putative transposase protein tnpa-rve | SAMEA3753290_03668 | Not Available | Negative | 3790518 - 3790904 | 15780.9 |
| transposon tn21 resolvase | SAMEA3753290_03669 | Not Available | Negative | 3790951 - 3791241 | 10878.2 |
| modulator protein | SAMEA3753290_03670 | Not Available | Negative | 3791367 - 3791567 | 7066.12 |
| class 1 integron integrase protein inti1 | SAMEA3753290_03671 | Not Available | Negative | 3791920 - 3792933 | 38383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





