Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease-related domain | SAMEA3753290_03632 | Not Available | Negative | 3749115 - 3749843 | 27899.4 |
| signal peptide peptidase | SAMEA3753290_03633 | Not Available | Negative | 3749845 - 3751026 | 42915.7 |
| conjugative transfer system protein | SAMEA3753290_03634 | Not Available | Negative | 3751039 - 3751701 | 25395.5 |
| uncharacterised protein | SAMEA3753290_03635 | Not Available | Negative | 3751688 - 3752791 | 42178.3 |
| conjugative coupling factor | SAMEA3753290_03636 | Not Available | Negative | 3752791 - 3754875 | 77974.2 |
| conjugative transfer system protein | SAMEA3753290_03637 | Not Available | Negative | 3754875 - 3757910 | 113055.0 |
| uncharacterised protein | SAMEA3753290_03638 | Not Available | Negative | 3757921 - 3758643 | 27886.0 |
| plasmid transfer protein | SAMEA3753290_03639 | Not Available | Negative | 3758640 - 3759125 | 19185.1 |
| plasmid transfer protein | SAMEA3753290_03640 | Not Available | Positive | 3759883 - 3760683 | 30287.5 |
| plasmid transfer protein | SAMEA3753290_03641 | Not Available | Positive | 3760686 - 3761198 | 19430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





