Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | SAMEA3753290_03557 | Not Available | Positive | 3677215 - 3678069 | 31517.6 |
| stationary phase inducible protein csie | SAMEA3753290_03558 | Not Available | Positive | 3678260 - 3679540 | 48978.2 |
| putative 3-phenylpropionate permease | SAMEA3753290_03559 | Not Available | Negative | 3679532 - 3680671 | 41595.1 |
| hca operon transcriptional activator | SAMEA3753290_03560 | Not Available | Negative | 3680831 - 3681721 | 32812.2 |
| 3-phenylpropionate dioxygenase alpha subunit | SAMEA3753290_03561 | Not Available | Positive | 3681857 - 3683218 | 51111.8 |
| 3-phenylpropionate dioxygenase beta subunit | SAMEA3753290_03562 | Not Available | Positive | 3683215 - 3683733 | 20561.3 |
| 3-phenylpropionate dioxygenase ferredoxin subunit | SAMEA3753290_03563 | Not Available | Positive | 3683733 - 3684053 | 11329.3 |
| 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase | SAMEA3753290_03564 | Not Available | Positive | 3684050 - 3684862 | 28471.3 |
| 3-phenylpropionate dioxygenase ferredoxin--nad(+) reductase component | SAMEA3753290_03565 | Not Available | Positive | 3684872 - 3686074 | 43966.8 |
| inner membrane protein | SAMEA3753290_03566 | Not Available | Positive | 3686171 - 3686593 | 15212.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





