Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 membrane subunit | SAMEA3753290_03504 | Not Available | Positive | 3618553 - 3618921 | 13219.5 |
| hydrogenase 4 subunit d | SAMEA3753290_03505 | Not Available | Positive | 3619115 - 3619696 | 20540.4 |
| hydrogenase-4 component e | SAMEA3753290_03506 | Not Available | Positive | 3619708 - 3620358 | 23363.0 |
| hydrogenase 4, membrane subunit hyff | SAMEA3753290_03507 | Not Available | Positive | 3620363 - 3621949 | 56718.6 |
| hydrogenase-4 subunit g | SAMEA3753290_03508 | Not Available | Positive | 3621939 - 3623606 | 63370.1 |
| hydrogenase-4 component h | SAMEA3753290_03509 | Not Available | Positive | 3623616 - 3624161 | 20161.4 |
| hydrogenase-4 subunit i | SAMEA3753290_03510 | Not Available | Positive | 3624158 - 3624679 | 18834.8 |
| protein processing element | SAMEA3753290_03511 | Not Available | Positive | 3624908 - 3625321 | 15534.8 |
| 2-component regulator | SAMEA3753290_03512 | Not Available | Positive | 3625351 - 3627363 | 75284.7 |
| formate transporter focb | SAMEA3753290_03513 | Not Available | Positive | 3627385 - 3628233 | 30619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





