Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | SAMEA3753290_03328 | Not Available | Positive | 3460784 - 3461113 | 11720.8 |
| putative protease | SAMEA3753290_03329 | Not Available | Negative | 3461152 - 3461973 | 29252.6 |
| acid shock protein | SAMEA3753290_03330 | Not Available | Negative | 3462249 - 3462557 | 10490.6 |
| major facilitator superfamily protein | SAMEA3753290_03331 | Not Available | Negative | 3462981 - 3464234 | 45260.2 |
| lysr family transcriptional regulator | SAMEA3753290_03332 | Not Available | Positive | 3464341 - 3465234 | 33297.4 |
| protein mlc (making large colonies protein) | SAMEA3753290_03333 | Not Available | Positive | 3465369 - 3466589 | 44292.7 |
| dithiobiotin synthetase | SAMEA3753290_03334 | Not Available | Positive | 3466714 - 3467409 | 24982.5 |
| voltage-gated clc-type chloride channel | SAMEA3753290_03335 | Not Available | Negative | 3467362 - 3468618 | 44126.1 |
| anaerobic dimethyl sulfoxide reductase maturation protein (twin-arginine leader-binding protein) | SAMEA3753290_03336 | Not Available | Negative | 3468813 - 3469427 | 23345.8 |
| putative dimethyl sulfoxide reductase, anchor subunit | SAMEA3753290_03337 | Not Available | Negative | 3469470 - 3470324 | 30493.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





