Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Regulatory protein ci | SAMEA3753290_04942 | Not Available | Negative | 5017252 - 5017671 | 16166.3 |
| Regulatory protein cro | SAMEA3753290_04943 | Not Available | Positive | 5017751 - 5018005 | 9211.13 |
| Cii protein | SAMEA3753290_04944 | Not Available | Positive | 5018002 - 5018427 | 15881.2 |
| Lygf | SAMEA3753290_05064 | Not Available | Positive | 5137214 - 5137636 | 16360.8 |
| Hypothetical protein | SAMEA3753290_05065 | Not Available | Positive | 5137694 - 5138050 | 14118.9 |
| Eaa protein | SAMEA3753290_05066 | Not Available | Positive | 5138230 - 5138664 | 16350.1 |
| Hypothetical protein | SAMEA3753290_05067 | Not Available | Positive | 5138664 - 5138825 | 6237.45 |
| Toxin-antitoxin system, putative toxin component | SAMEA3753290_05068 | Not Available | Negative | 5139266 - 5139565 | 11432.6 |
| Putative addiction module antidote protein | SAMEA3753290_05069 | Not Available | Negative | 5139571 - 5139828 | 9361.02 |
| Hypothetical protein | SAMEA3753290_05070 | Not Available | Positive | 5140238 - 5141293 | 39545.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





