Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-d-glucuronidase | SAMEA3753290_03308 | Not Available | Positive | 3438043 - 3439854 | 68492.7 |
| glucuronide permease | SAMEA3753290_03309 | Not Available | Positive | 3439851 - 3441224 | 49941.0 |
| outer membrane porin protein | SAMEA3753290_03310 | Not Available | Positive | 3441263 - 3441553 | 10310.4 |
| outer membrane porin protein | SAMEA3753290_03311 | Not Available | Positive | 3441689 - 3442528 | 31203.7 |
| putative gtp-binding protein | SAMEA3753290_03312 | Not Available | Negative | 3442573 - 3444081 | 54688.1 |
| mannose-6-phosphate isomerase | SAMEA3753290_03313 | Not Available | Negative | 3444182 - 3445357 | 42758.1 |
| class i fumarate hydratase | SAMEA3753290_03314 | Not Available | Positive | 3445556 - 3447202 | 60302.0 |
| fumarate hydratase class ii | SAMEA3753290_03315 | Not Available | Positive | 3447345 - 3448748 | 50464.8 |
| dna replication terminus site-binding protein | SAMEA3753290_03316 | Not Available | Negative | 3448745 - 3449674 | 35743.1 |
| two component sensor kinase | SAMEA3753290_03317 | Not Available | Negative | 3449750 - 3451051 | 49299.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





