Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex protein rnfa | SAMEA3753290_03298 | Not Available | Negative | 3427759 - 3428340 | 20898.8 |
| inner membrane protein | SAMEA3753290_03299 | Not Available | Negative | 3428417 - 3428857 | 16337.5 |
| h-ns-and stpa-binding protein | SAMEA3753290_03300 | Not Available | Negative | 3428943 - 3429158 | 8417.05 |
| oxidoreductase | SAMEA3753290_03301 | Not Available | Positive | 3429799 - 3430839 | 38244.5 |
| adenosine deaminase | SAMEA3753290_03302 | Not Available | Negative | 3430874 - 3431875 | 36369.6 |
| protein maly | SAMEA3753290_03303 | Not Available | Negative | 3431979 - 3433151 | 43658.2 |
| pts system maltose and glucose-specific transporter subunit iicb | SAMEA3753290_03304 | Not Available | Negative | 3433161 - 3434753 | 56643.5 |
| maltose regulon regulatory protein | SAMEA3753290_03305 | Not Available | Positive | 3434928 - 3435956 | 36614.9 |
| 7-alpha-hydroxysteroid dehydrogenase | SAMEA3753290_03306 | Not Available | Positive | 3436068 - 3436835 | 26780.2 |
| uid operon repressor | SAMEA3753290_03307 | Not Available | Positive | 3437076 - 3437654 | 21308.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





