Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine kinase | SAMEA3753290_03288 | Not Available | Positive | 3418221 - 3419081 | 31192.8 |
| glutathione s-transferase | SAMEA3753290_03289 | Not Available | Negative | 3419125 - 3419730 | 22888.6 |
| tripeptide transporter permease | SAMEA3753290_03290 | Not Available | Negative | 3419836 - 3421338 | 53994.4 |
| uncharacterised protein | SAMEA3753290_03291 | Not Available | Negative | 3421621 - 3421821 | 7754.59 |
| endonuclease iii | SAMEA3753290_03292 | Not Available | Negative | 3421949 - 3422584 | 23563.7 |
| electron transport complex protein | SAMEA3753290_03293 | Not Available | Negative | 3422584 - 3423279 | 24460.5 |
| electron transport complex protein | SAMEA3753290_03294 | Not Available | Negative | 3423283 - 3423903 | 21943.2 |
| electron transport complex protein | SAMEA3753290_03295 | Not Available | Negative | 3423907 - 3424965 | 38126.4 |
| putative transport protein | SAMEA3753290_03296 | Not Available | Negative | 3424966 - 3427188 | 80241.9 |
| electron transport complex protein | SAMEA3753290_03297 | Not Available | Negative | 3427181 - 3427759 | 20544.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





