Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753290_03224 | Not Available | Positive | 3354451 - 3354627 | 6478.01 |
| arac family transcriptional regulator | SAMEA3753290_03225 | Not Available | Positive | 3354730 - 3355641 | 34896.2 |
| putative acyl-coa dehydrogenase | SAMEA3753290_03226 | Not Available | Negative | 3355684 - 3356835 | 43004.6 |
| putative coa transferase | SAMEA3753290_03227 | Not Available | Negative | 3356849 - 3358444 | 57530.6 |
| 3-dehydroquinate dehydratase | SAMEA3753290_03228 | Not Available | Negative | 3358589 - 3359347 | 27521.3 |
| quinate/shikimate dehydrogenase | SAMEA3753290_03229 | Not Available | Negative | 3359378 - 3360244 | 31229.6 |
| major facilitator superfamily protein | SAMEA3753290_03230 | Not Available | Negative | 3360256 - 3361521 | 46036.9 |
| major facilitator superfamily protein | SAMEA3753290_03231 | Not Available | Negative | 3361748 - 3362962 | 44573.7 |
| ydil protein | SAMEA3753290_03232 | Not Available | Negative | 3363062 - 3363418 | 13901.6 |
| inner membrane protein | SAMEA3753290_03234 | Not Available | Negative | 3363847 - 3364959 | 39843.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





