Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | SAMEA3753290_03202 | Not Available | Positive | 3333502 - 3333936 | 16638.4 |
| 50s ribosomal subunit protein l35 | SAMEA3753290_03203 | Not Available | Positive | 3334033 - 3334230 | 7289.38 |
| 50s ribosomal protein l20 | SAMEA3753290_03204 | Not Available | Positive | 3334283 - 3334639 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3753290_03206 | Not Available | Positive | 3335089 - 3336072 | 36803.9 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3753290_03207 | Not Available | Positive | 3336087 - 3338474 | 87357.2 |
| vitamin b12 abc transporter, permease protein | SAMEA3753290_03209 | Not Available | Positive | 3338879 - 3339859 | 35084.7 |
| vitamin b12 transport periplasmic protein (putative glutathione peroxidase) | SAMEA3753290_03210 | Not Available | Positive | 3339922 - 3340473 | 20426.5 |
| vitamin b12 abc transporter, atp-binding protein | SAMEA3753290_03211 | Not Available | Positive | 3340473 - 3341222 | 27113.0 |
| putative lipoprotein | SAMEA3753290_03212 | Not Available | Positive | 3341300 - 3341764 | 17283.7 |
| putative diguanylate phosphodiesterase | SAMEA3753290_03213 | Not Available | Positive | 3342011 - 3342724 | 27047.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





