Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylornithine transaminase | SAMEA3753290_03172 | Not Available | Positive | 3302265 - 3303485 | 43697.8 |
| arginine n-succinyltransferase | SAMEA3753290_03173 | Not Available | Positive | 3303482 - 3304516 | 38429.9 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | SAMEA3753290_03174 | Not Available | Positive | 3304513 - 3305991 | 53076.4 |
| n-succinylarginine dihydrolase | SAMEA3753290_03175 | Not Available | Positive | 3305988 - 3307331 | 49326.3 |
| succinylglutamate desuccinylase | SAMEA3753290_03176 | Not Available | Positive | 3307324 - 3308292 | 35787.3 |
| spheroplast protein y | SAMEA3753290_03177 | Not Available | Positive | 3308622 - 3309107 | 18172.1 |
| acyl-coa dehydrogenase | SAMEA3753290_03178 | Not Available | Positive | 3309310 - 3309885 | 21544.1 |
| excinuclease cho | SAMEA3753290_03179 | Not Available | Negative | 3309845 - 3310732 | 33740.8 |
| nh3-dependent nad(+) synthetase | SAMEA3753290_03180 | Not Available | Negative | 3310962 - 3311789 | 30698.6 |
| osmotically inducible lipoprotein e | SAMEA3753290_03181 | Not Available | Positive | 3311991 - 3312329 | 12021.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





