Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine sulfoxide reductase b | SAMEA3753290_03142 | Not Available | Positive | 3271818 - 3272231 | 15452.0 |
| putative cytoplasmic protein | SAMEA3753290_03143 | Not Available | Positive | 3272273 - 3272545 | 10238.4 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3753290_03144 | Not Available | Positive | 3272915 - 3273991 | 38715.9 |
| major facilitator superfamily protein | SAMEA3753290_03145 | Not Available | Positive | 3274018 - 3275397 | 49590.9 |
| putative zinc-binding dehydrogenase | SAMEA3753290_03146 | Not Available | Positive | 3275414 - 3276457 | 37789.1 |
| putative sugar-bisphosphate aldolase | SAMEA3753290_03147 | Not Available | Positive | 3276478 - 3277314 | 30839.5 |
| sugar kinase | SAMEA3753290_03148 | Not Available | Positive | 3277319 - 3278266 | 34234.3 |
| putative sugar reductase | SAMEA3753290_03149 | Not Available | Positive | 3278276 - 3279256 | 36372.0 |
| deor-family transcriptional regulator | SAMEA3753290_03150 | Not Available | Positive | 3279393 - 3280151 | 28252.0 |
| metabolite transport protein | SAMEA3753290_03151 | Not Available | Positive | 3280268 - 3281626 | 50268.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





