Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | SAMEA3753290_03111 | Not Available | Positive | 3237556 - 3238818 | 47781.8 |
| hydrolase | SAMEA3753290_03112 | Not Available | Negative | 3239002 - 3240519 | 57375.3 |
| putative pagc-like membrane protein | SAMEA3753290_03113 | Not Available | Negative | 3241295 - 3241852 | 20352.9 |
| transposase | SAMEA3753290_03114 | Not Available | Positive | 3242415 - 3243611 | 43139.6 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3753290_03115 | Not Available | Negative | 3243625 - 3244008 | 14895.4 |
| malate transporter | SAMEA3753290_03116 | Not Available | Negative | 3244174 - 3244743 | 21748.9 |
| putative phage-related regulatory protein | SAMEA3753290_03117 | Not Available | Positive | 3246371 - 3246577 | 7800.53 |
| uncharacterised protein | SAMEA3753290_03118 | Not Available | Positive | 3246671 - 3247273 | 23666.5 |
| phage-associated protein | SAMEA3753290_03119 | Not Available | Positive | 3248713 - 3249735 | 39981.9 |
| putative gtp-binding protein | SAMEA3753290_03120 | Not Available | Positive | 3249819 - 3250691 | 32452.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





