Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-restriction protein | SAMEA3753290_03101 | Not Available | Positive | 3232656 - 3233135 | 18168.4 |
| putative dna repair protein | SAMEA3753290_03102 | Not Available | Positive | 3233151 - 3233627 | 17626.3 |
| cp4-44 prophage | SAMEA3753290_03103 | Not Available | Positive | 3233690 - 3233911 | 8427.2 |
| yagb/yeeu/yfjz family protein | SAMEA3753290_03104 | Not Available | Positive | 3233991 - 3234365 | 13696.1 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753290_03105 | Not Available | Positive | 3234412 - 3234789 | 14061.9 |
| aec77 | SAMEA3753290_03106 | Not Available | Positive | 3234786 - 3235274 | 17996.4 |
| aec78 | SAMEA3753290_03107 | Not Available | Positive | 3235286 - 3235483 | 7507.91 |
| putative restriction methylase | SAMEA3753290_03108 | Not Available | Positive | 3235568 - 3236434 | 33477.9 |
| cc2985 family addiction module antidote protein | SAMEA3753290_03109 | Not Available | Positive | 3236506 - 3236769 | 9779.5 |
| plasmid stabilisation system protein | SAMEA3753290_03110 | Not Available | Positive | 3236766 - 3237092 | 12420.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





