Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoimidazole riboside kinase | SAMEA3753290_03081 | Not Available | Negative | 3213023 - 3213943 | 32967.6 |
| uncharacterised protein | SAMEA3753290_03082 | Not Available | Positive | 3214168 - 3214299 | 4928.97 |
| type i restriction modification dna specificity domain-containing protein | SAMEA3753290_03083 | Not Available | Negative | 3215005 - 3215763 | 28214.8 |
| putative transposase | SAMEA3753290_03084 | Not Available | Positive | 3215764 - 3216687 | 33904.9 |
| phosphoglucosamine mutase | SAMEA3753290_03085 | Not Available | Negative | 3216863 - 3217165 | 11074.5 |
| dihydropteroate synthase | SAMEA3753290_03086 | Not Available | Negative | 3217252 - 3218067 | 28471.1 |
| putative immunoglobuling-binding protein | SAMEA3753290_03087 | Not Available | Negative | 3218308 - 3218874 | 19051.3 |
| is2 element protein | SAMEA3753290_03088 | Not Available | Negative | 3221423 - 3222328 | 34285.8 |
| transposase | SAMEA3753290_03089 | Not Available | Negative | 3222286 - 3222651 | 13452.4 |
| is encoded protein | SAMEA3753290_03090 | Not Available | Positive | 3222662 - 3222931 | 9912.94 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





