Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase c | SAMEA3753290_03061 | Not Available | Positive | 3188922 - 3190001 | 40114.8 |
| nucleoside permease | SAMEA3753290_03062 | Not Available | Positive | 3190203 - 3191459 | 46392.0 |
| ornithine decarboxylase | SAMEA3753290_03063 | Not Available | Negative | 3191509 - 3193644 | 79455.6 |
| membrane protein yqga | SAMEA3753290_03064 | Not Available | Positive | 3194042 - 3194749 | 24645.5 |
| Trna-phe | Not Available | Not Available | Positive | 3194855 - 3194930 | Not Available |
| site-specific recombinase, phage integrase | SAMEA3753290_03066 | Not Available | Positive | 3195107 - 3196291 | 45397.0 |
| transposase, is903.b | SAMEA3753290_03067 | Not Available | Negative | 3196337 - 3197260 | 34939.1 |
| shia-like protein | SAMEA3753290_03068 | Not Available | Positive | 3197797 - 3198840 | 40158.5 |
| hydrolase | SAMEA3753290_03069 | Not Available | Negative | 3198984 - 3200657 | 63397.6 |
| uncharacterised protein | SAMEA3753290_03070 | Not Available | Negative | 3200723 - 3200920 | 7066.42 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





