Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, upf0235 family | SAMEA3753290_03051 | Not Available | Positive | 3180872 - 3181162 | 10429.8 |
| deoxyribonucleotide triphosphate pyrophosphatase | SAMEA3753290_03052 | Not Available | Positive | 3181170 - 3181763 | 20964.9 |
| putative oxygen-independent coproporphyrinogen iii oxidase | SAMEA3753290_03053 | Not Available | Positive | 3181756 - 3182892 | 42521.6 |
| putative alpha helix chain | SAMEA3753290_03054 | Not Available | Negative | 3183047 - 3184054 | 38475.4 |
| l-asparaginase 2 | SAMEA3753290_03055 | Not Available | Negative | 3184171 - 3185217 | 36837.7 |
| protein | SAMEA3753290_03056 | Not Available | Negative | 3185393 - 3186112 | 26430.8 |
| protein | SAMEA3753290_03057 | Not Available | Negative | 3186296 - 3186622 | 12881.2 |
| trna (guanine-n(7)-)-methyltransferase | SAMEA3753290_03058 | Not Available | Negative | 3186622 - 3187341 | 27308.9 |
| adenine dna glycosylase | SAMEA3753290_03059 | Not Available | Positive | 3187502 - 3188554 | 39167.2 |
| fe(2+)-trafficking protein | SAMEA3753290_03060 | Not Available | Positive | 3188582 - 3188857 | 10953.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





