Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythrose 4-phosphate dehydrogenase | SAMEA3753290_03021 | Not Available | Negative | 3153155 - 3154174 | 37301.5 |
| dna-binding protein | SAMEA3753290_03022 | Not Available | Positive | 3154546 - 3154977 | 15523.7 |
| abc-type transport system | SAMEA3753290_03023 | Not Available | Positive | 3155000 - 3155578 | 20155.8 |
| abc transporter permease | SAMEA3753290_03024 | Not Available | Positive | 3155579 - 3156286 | 26802.4 |
| abc transporter atp-binding protein | SAMEA3753290_03025 | Not Available | Positive | 3156274 - 3156951 | 25062.3 |
| abc transporter atp-binding protein | SAMEA3753290_03026 | Not Available | Positive | 3156945 - 3157622 | 24927.9 |
| fructose transport system kinase | SAMEA3753290_03027 | Not Available | Negative | 3157594 - 3158307 | 26759.9 |
| putative transcriptional regulator | SAMEA3753290_03028 | Not Available | Negative | 3158304 - 3158813 | 19175.8 |
| putative sugar-bisphosphatase | SAMEA3753290_03029 | Not Available | Negative | 3158835 - 3159800 | 34323.5 |
| putative oxidoreductase | SAMEA3753290_03030 | Not Available | Negative | 3159797 - 3160567 | 27141.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





