Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Repressor protein c1 | SAMEA3753290_04791 | Not Available | Positive | 4875964 - 4876815 | 32501.0 |
| Putative large terminase protein | SAMEA3753290_04792 | Not Available | Negative | 4876840 - 4878324 | 55606.7 |
| Terminase a protein paca | SAMEA3753290_04793 | Not Available | Negative | 4878324 - 4879517 | 45296.4 |
| Late promoter-activating protein lpa | SAMEA3753290_04794 | Not Available | Negative | 4879603 - 4880055 | 18118.8 |
| Hypothetical protein | SAMEA3753290_04795 | Not Available | Negative | 4880144 - 4881187 | 39776.9 |
| Pdca | SAMEA3753290_04796 | Not Available | Negative | 4881215 - 4881394 | 6776.63 |
| Toxin doc | SAMEA3753290_04797 | Not Available | Negative | 4881399 - 4881779 | 13616.1 |
| Prevention of host death by doc toxicity | SAMEA3753290_04798 | Not Available | Negative | 4881779 - 4882000 | 8133.53 |
| Putative dna repair protein | SAMEA3753290_04799 | Not Available | Negative | 4882073 - 4882462 | 14268.8 |
| Hypothetical protein | SAMEA3753290_04800 | Not Available | Positive | 4882637 - 4883221 | 22589.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





