Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | SAMEA3753290_03011 | Not Available | Positive | 3141333 - 3143477 | 77926.6 |
| lao/ao transport system kinase | SAMEA3753290_03012 | Not Available | Positive | 3143470 - 3144465 | 36731.2 |
| methylmalonyl-coa decarboxylase | SAMEA3753290_03013 | Not Available | Positive | 3144476 - 3145261 | 29174.3 |
| putative acetyl-coa hydrolase/transferase | SAMEA3753290_03014 | Not Available | Positive | 3145285 - 3146763 | 53843.6 |
| dna-binding transcriptional regulator | SAMEA3753290_03015 | Not Available | Negative | 3146760 - 3147656 | 34575.6 |
| oxidative stress defense protein | SAMEA3753290_03016 | Not Available | Negative | 3147823 - 3148563 | 26636.7 |
| arginine exporter | SAMEA3753290_03017 | Not Available | Negative | 3148656 - 3149291 | 23203.1 |
| mechanosensitive channel mscs | SAMEA3753290_03018 | Not Available | Negative | 3149430 - 3150290 | 30897.9 |
| fructose-bisphosphate aldolase | SAMEA3753290_03019 | Not Available | Negative | 3150648 - 3151727 | 39149.4 |
| phosphoglycerate kinase | SAMEA3753290_03020 | Not Available | Negative | 3151942 - 3153105 | 41120.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





