Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3753290_02988 | Not Available | Negative | 3120628 - 3121035 | 16065.0 |
| tpr repeat protein | SAMEA3753290_02989 | Not Available | Negative | 3121016 - 3121282 | 10547.7 |
| pp_02851 | SAMEA3753290_02990 | Not Available | Positive | 3121525 - 3122505 | Not Available |
| hemolysin (membrane protein) | SAMEA3753290_02991 | Not Available | Negative | 3122582 - 3123241 | 23848.2 |
| putative cytoplasmic protein | SAMEA3753290_02992 | Not Available | Negative | 3123405 - 3123716 | 11891.0 |
| 6-phospho-beta-glucosidase | SAMEA3753290_02993 | Not Available | Positive | 3123761 - 3125194 | 55167.4 |
| nad(p)-binding oxidoreductase with nad(p)-binding rossmann-fold domain | SAMEA3753290_02994 | Not Available | Negative | 3125251 - 3125994 | 25994.1 |
| glycine dehydrogenase | SAMEA3753290_02995 | Not Available | Negative | 3126260 - 3129133 | 104366.0 |
| glycine cleavage system protein h | SAMEA3753290_02996 | Not Available | Negative | 3129251 - 3129640 | 13811.8 |
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3753290_02997 | Not Available | Negative | 3129664 - 3130758 | 40091.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





