Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenium-dependent hydroxylase accessory protein yqec | SAMEA3753290_02968 | Not Available | Negative | 3094500 - 3095270 | 28179.1 |
| ctp:molybdopterin cytidylyltransferase | SAMEA3753290_02969 | Not Available | Positive | 3095436 - 3095951 | 19246.5 |
| pyridine nucleotide-disulfide oxidoreductase | SAMEA3753290_02970 | Not Available | Positive | 3096273 - 3099371 | 115658.0 |
| putative amidohydrolase | SAMEA3753290_02971 | Not Available | Positive | 3099374 - 3100702 | 48887.3 |
| putative fad binding molybdopterin dehydrogenase | SAMEA3753290_02972 | Not Available | Positive | 3100753 - 3101532 | 28635.2 |
| selenate reductase subunit ygfn | SAMEA3753290_02973 | Not Available | Positive | 3101529 - 3104399 | 103527.0 |
| putative purine permease | SAMEA3753290_02974 | Not Available | Positive | 3104564 - 3105964 | 49111.5 |
| guanine deaminase | SAMEA3753290_02975 | Not Available | Positive | 3105982 - 3107298 | 50101.8 |
| putative permease | SAMEA3753290_02976 | Not Available | Positive | 3107334 - 3108701 | 46761.0 |
| electron transport protein ygfs | SAMEA3753290_02977 | Not Available | Negative | 3108737 - 3109225 | 17514.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





