Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase subunit xdha | SAMEA3753290_02958 | Not Available | Positive | 3080699 - 3082996 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3753290_02959 | Not Available | Positive | 3083007 - 3083885 | 31586.7 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3753290_02960 | Not Available | Positive | 3083882 - 3084361 | 16922.7 |
| transcriptional regulator | SAMEA3753290_02961 | Not Available | Negative | 3084401 - 3086179 | 66087.0 |
| putative aspartate/ornithine carbamoyltransferase | SAMEA3753290_02962 | Not Available | Positive | 3086658 - 3087845 | 44058.7 |
| putative diaminopropionate ammonia-lyase | SAMEA3753290_02963 | Not Available | Positive | 3087903 - 3089099 | 43330.1 |
| putative peptidase | SAMEA3753290_02964 | Not Available | Positive | 3089157 - 3090368 | 44806.4 |
| phenylhydantoinase | SAMEA3753290_02965 | Not Available | Positive | 3090421 - 3091806 | 51060.2 |
| carbamate kinase | SAMEA3753290_02966 | Not Available | Positive | 3091854 - 3092786 | 33072.9 |
| nad(p)-binding rossman fold | SAMEA3753290_02967 | Not Available | Negative | 3092827 - 3094452 | 57697.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





