Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | SAMEA3753290_02948 | Not Available | Negative | 3074419 - 3074532 | 4229.09 |
| type iii secretion apparatus protein | SAMEA3753290_02949 | Not Available | Negative | 3074550 - 3074966 | 16381.2 |
| type iii secretion system protein | SAMEA3753290_02950 | Not Available | Negative | 3074956 - 3075465 | 18851.6 |
| type iii secretion system protein | SAMEA3753290_02951 | Not Available | Negative | 3075478 - 3076248 | 28131.1 |
| type iii secretion system protein inva | SAMEA3753290_02952 | Not Available | Negative | 3076280 - 3076807 | 20037.8 |
| protein eivf | SAMEA3753290_02953 | Not Available | Negative | 3076810 - 3076941 | 5001.28 |
| protein of uncharacterised function (duf2566) | SAMEA3753290_02954 | Not Available | Negative | 3077287 - 3077466 | 6706.58 |
| protein | SAMEA3753290_02955 | Not Available | Negative | 3077533 - 3079143 | 60371.6 |
| Trna-gly | Not Available | Not Available | Positive | 3079377 - 3079450 | Not Available |
| lipoprotein yger | SAMEA3753290_02957 | Not Available | Negative | 3079529 - 3080284 | 26566.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





