Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system protein | SAMEA3753290_02938 | Not Available | Positive | 3069524 - 3069817 | 11046.2 |
| type iii secretion system protein | SAMEA3753290_02939 | Not Available | Negative | 3069879 - 3070241 | 13860.6 |
| flhb/hrpn/yscu/spas family protein | SAMEA3753290_02940 | Not Available | Negative | 3070268 - 3070471 | 8275.5 |
| type iii secretion system protein spas | SAMEA3753290_02941 | Not Available | Negative | 3070539 - 3071009 | 18027.6 |
| type iii secretion system protein | SAMEA3753290_02942 | Not Available | Negative | 3071018 - 3071785 | 28287.8 |
| type iii secretion system protein | SAMEA3753290_02943 | Not Available | Negative | 3071787 - 3072047 | 9429.87 |
| type iii secretion system protein | SAMEA3753290_02944 | Not Available | Negative | 3072057 - 3072722 | 24634.6 |
| surface presentation of antigens protein spao | SAMEA3753290_02945 | Not Available | Negative | 3072712 - 3073659 | 36140.3 |
| eivj | SAMEA3753290_02946 | Not Available | Negative | 3073659 - 3074006 | 13732.5 |
| type iii secretion system protein | SAMEA3753290_02947 | Not Available | Negative | 3074069 - 3074422 | 13100.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





