Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | SAMEA3753290_02854 | Not Available | Negative | 2987730 - 2989070 | 49143.9 |
| glucarate dehydratase | SAMEA3753290_02855 | Not Available | Negative | 2989091 - 2990431 | 48871.4 |
| glucarate transporter | SAMEA3753290_02856 | Not Available | Negative | 2990433 - 2991785 | 49145.0 |
| putative flavodoxin | SAMEA3753290_02857 | Not Available | Negative | 2992220 - 2992669 | 16257.0 |
| trna pseudouridine synthase c | SAMEA3753290_02858 | Not Available | Negative | 2992687 - 2993469 | 29657.4 |
| domain of uncharacterised function, duf446 | SAMEA3753290_02859 | Not Available | Negative | 2993469 - 2993798 | 12772.2 |
| putative secy-interacting protein | SAMEA3753290_02861 | Not Available | Negative | 2994420 - 2994965 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | SAMEA3753290_02862 | Not Available | Positive | 2995033 - 2995881 | 32547.2 |
| putative decarboxylase | SAMEA3753290_02863 | Not Available | Positive | 2995993 - 2997357 | 50975.0 |
| serine transporter | SAMEA3753290_02864 | Not Available | Positive | 2997914 - 2999203 | 46909.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





