Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol antiterminator regulatory protein | SAMEA3753290_02834 | Not Available | Positive | 2963760 - 2964335 | 20787.6 |
| electron transfer flavoprotein subunit ygcq | SAMEA3753290_02835 | Not Available | Negative | 2964483 - 2965343 | 30307.4 |
| electron transfer flavoprotein subunit ygcr | SAMEA3753290_02836 | Not Available | Negative | 2965340 - 2966119 | 28750.1 |
| major facilitator superfamily protein | SAMEA3753290_02837 | Not Available | Negative | 2966097 - 2967506 | 50862.3 |
| putative fad-binding oxidoreductase | SAMEA3753290_02838 | Not Available | Negative | 2967528 - 2968982 | 53698.4 |
| putative short chain dehydrogenase | SAMEA3753290_02839 | Not Available | Negative | 2969052 - 2969837 | 28085.6 |
| major facilitator superfamily protein | SAMEA3753290_02840 | Not Available | Positive | 2970156 - 2971433 | 46803.5 |
| putative sugar kinase | SAMEA3753290_02841 | Not Available | Positive | 2971460 - 2972938 | 54195.9 |
| domain of uncharacterised function (duf2825) | SAMEA3753290_02842 | Not Available | Positive | 2973572 - 2974036 | 16562.2 |
| 7-carboxy-7-deazaguanine synthase | SAMEA3753290_02843 | Not Available | Negative | 2974432 - 2975103 | 25061.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





