Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein | SAMEA3753290_02745 | Not Available | Negative | 2884577 - 2884822 | 8949.43 |
| dihydroorotase | SAMEA3753290_02746 | Not Available | Negative | 2884896 - 2885942 | 38828.6 |
| putative lipoprotein | SAMEA3753290_02747 | Not Available | Negative | 2886048 - 2886608 | 20501.0 |
| glutaredoxin | SAMEA3753290_02748 | Not Available | Negative | 2886742 - 2887389 | 24351.6 |
| multidrug resistance protein mdth | SAMEA3753290_02749 | Not Available | Negative | 2887453 - 2888319 | 32030.3 |
| multidrug resistance protein mdth | SAMEA3753290_02750 | Not Available | Negative | 2888312 - 2888647 | 12530.8 |
| ribosomal-protein-alanine acetyltransferase | SAMEA3753290_02751 | Not Available | Positive | 2888883 - 2889467 | 22689.1 |
| conserved protein, upf0502 family | SAMEA3753290_02752 | Not Available | Positive | 2889478 - 2890125 | 24140.7 |
| putative oxidoreductase | SAMEA3753290_02753 | Not Available | Positive | 2890127 - 2891050 | 33683.4 |
| integral membrane protein mvin | SAMEA3753290_02754 | Not Available | Positive | 2891160 - 2892695 | 55270.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





