Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tube structural protein gp16 | SAMEA3753290_04761 | Not Available | Positive | 4841516 - 4842352 | 31311.4 |
| Tail fiber protein r | SAMEA3753290_04762 | Not Available | Positive | 4842431 - 4842865 | 15962.0 |
| Tail fibrer protein gps | SAMEA3753290_04763 | Not Available | Positive | 4842877 - 4847061 | 141720.0 |
| Tail fiber assembly protein | SAMEA3753290_04764 | Not Available | Positive | 4847061 - 4847471 | 14665.1 |
| Dna invertase | SAMEA3753290_04765 | Not Available | Negative | 4847615 - 4847764 | 5488.59 |
| Hypothetical protein | SAMEA3753290_04766 | Not Available | Positive | 4847892 - 4848173 | 10551.9 |
| Lysis determining protein lyda | SAMEA3753290_04767 | Not Available | Positive | 4848241 - 4848570 | 11467.2 |
| Lysis determining protein lydb | SAMEA3753290_04768 | Not Available | Positive | 4848567 - 4849010 | 17197.8 |
| Conserved protein of unknown function hdf | SAMEA3753290_04769 | Not Available | Positive | 4848997 - 4849599 | 21787.2 |
| Dara | SAMEA3753290_04770 | Not Available | Positive | 4849601 - 4851520 | 69421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





