Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1420901 bp
Thymine Count
1429063 bp
Guanine Count
1451151 bp
Cytosine Count
1431767 bp
Genome Length
5733849 bp
Protein-coding Genes
5145 genes
Non-Coding Genes
448 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3753290_02634 | Not Available | Positive | 2770458 - 2771000 | 20589.9 |
| putative 2fe-2s iron-sulfur cluster binding protein | SAMEA3753290_02635 | Not Available | Negative | 2770997 - 2772106 | 40662.6 |
| putative rna methylase | SAMEA3753290_02636 | Not Available | Positive | 2772350 - 2774458 | 78828.5 |
| abc transporter atp-binding protein | SAMEA3753290_02637 | Not Available | Positive | 2774470 - 2776377 | 72126.2 |
| paraquat-inducible protein a | SAMEA3753290_02638 | Not Available | Positive | 2776507 - 2777760 | 46466.2 |
| paraquat-inducible protein b | SAMEA3753290_02639 | Not Available | Positive | 2777765 - 2779405 | 60497.0 |
| putative lipoprotein | SAMEA3753290_02640 | Not Available | Positive | 2779402 - 2779965 | 20635.6 |
| ribosome modulation factor | SAMEA3753290_02641 | Not Available | Positive | 2780221 - 2780388 | 6507.88 |
| 3-hydroxydecanoyl-acp dehydratase | SAMEA3753290_02642 | Not Available | Negative | 2780458 - 2781084 | 23066.3 |
| protease la | SAMEA3753290_02643 | Not Available | Negative | 2781045 - 2782805 | 65808.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





